Welcome
Exploring the intersection of life sciences and technology.
About Me
Who Am I ?
Biology undergraduate at METU with a strong interest in bioinformatics and biotechnology, where I merge laboratory knowledge with computational problem-solving. Passionate about extracting insights from protein and DNA sequences NGS data, and biological datasets.
Skilled in Python, R, and Java, with experience building backend systems, APIs, and cloud-based pipelines using Docker, AWS, and GCP. I aim to bridge biology and technology by applying computational tools to real-world challenges in biotech and biomedical research.
What I Know
Programming &
Statistics
A strong foundation in Python, R, and Java supports my work in algorithms, statistics, and machine learning, with applications in bioinformatics, genomics, and computational biology.
NGS &
Analytics
Skilled in NGS pipelines, covering QC, trimming, alignment, SAM/BAM/BED handling, peak calling (ChIP-seq), DEG and enrichment analysis (RNA-seq), functional insights through GO/KEGG, correlation studies, and visualization with IGV, with hands-on experience in both Linux and Galaxy environments.
DevOps &
Cloud
Experienced in deploying applications with Docker and managing scalable workflows on AWS and GCP. Skilled in CI/CD practices and cloud integration to support bioinformatics and backend systems.
Protein &
DNA seq Analysis
Experienced in sequence analysis using BLAST, BLAT, CLUSTAL O, pairwise/ multiple alignments, motif discovery (MEME Suite), and EMBOSS tools. Skilled in leveraging UCSC Genome Browser, Ensembl, PDB, AlphaFold, and Chimera for structural and functional insights.
Backend &
APIs
Skilled in building robust backend systems using Django, Flask, and FastAPI. Experienced in designing and integrating REST APIs for scalable applications and data-driven workflows.
Data Bases
Proficient in designing and managing databases using MongoDB, PostgreSQL, and SQLite. Experienced in querying, structuring, and optimizing data for backend applications.
My Skills
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R/Python/Java
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NGS & Analytics
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Data Analytics
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Linux/ Bash scripting
Upcoming Projects
